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PHYS2018BARTH2896 PHYS

A Stochastic Differential Equation Model of Virus Replication

Type: Undergraduate
Author(s): Dylan Barth Physics & Astronomy Hana Dobrovolny Physics & Astronomy
Advisor(s): Hana Dobrovolny Physics & Astronomy

In this experiment we take the differential equation model from Heldt 2012 for the viral life cycle and apply a stochastic algorithm in order to simulate random events on a molecular level. We then introduce a known mechanism by which to mutate the produced virus particles and attempt to understand the relationship between surface proteins and these random mutations. This work will shed light on the efficacy of particular antiviral drugs that act on the binding of surface proteins to the cell membrane.

(Presentation is private)

PHYS2018KHAN44160 PHYS

Comparing Infection Parameters for Respiratory Syncytial Virus in Different Aged Cotton Rats

Type: Undergraduate
Author(s): Shaheer Khan Physics & Astronomy
Advisor(s): Hana Dobrovolny Physics & Astronomy

Respiratory syncytial virus (RSV) is an extremely common viral respiratory infection that currently has no vaccine or treatment. One of the issues in developing a treatment has been that immune system responses in both humans and rats vary in their susceptibility to RSV across different age groups. In this study, we use a mathematical model to quantify the viral kinetics of RSV and analyze its relationship to age. After fitting the model to experimental data, six parameter values were determined and used to calculate the eclipse phase length, infection phase length, basic reproductive number, and infecting time. These values were compared by age and collection site. After running several statistical tests, there was no major trend with the parameter values in relation to either age or collection site. This result provides the foundations for further studies to explore how viral models can better represent RSV and understand the immune response in general.

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PHYS2018RICHSTEIN7035 PHYS

The effects of dwarf-galaxy tug-of-wars

Type: Undergraduate
Author(s): Hannah Richstein Physics & Astronomy Jing Sun Physics & Astronomy
Advisor(s): Kat Barger Physics & Astronomy

Galaxies are not alone in space; often, they have neighboring galaxies with which they gravitationally interact. These interactions foster diverse characteristics, such as size, morphology, and color. This project studies the properties of galaxies in the context of their neighbors and environment. More specifically, I examine how the proximity between galaxies affects their evolution. I do this by exploring two samples: 1) galaxy pairs within a few galactic diameters of each other and 2) isolated galaxies separated from the next nearest galaxy by more than ~450,000 light years. Using existing Mapping Nearby Galaxies at Apache Point Observatory observations, part of the Sloan Digital Sky Survey IV, I determine the various types of ionization conditions present at different radii throughout each galaxy. Through these efforts, I explore which processes promote and hinder star formation within galaxies.

(Presentation is private)

PHYS2018RYAN16053 PHYS

Modifying the Optical Properties of Graphene Oxide via an Electric Field

Type: Undergraduate
Author(s): Conor Ryan Physics & Astronomy Fabian Grote Physics & Astronomy Anton Naumov Physics & Astronomy Thomas Paz Physics & Astronomy
Advisor(s): Anton Naumov Physics & Astronomy

Graphene is a promising material, due to its various inherent properties that will lead to better, smaller, faster, or flexible electronics. Graphene doesn’t exhibit optical emission, limiting its potential use in optoelectronics. However, graphene’s functional derivative Graphene Oxide (GO) maintains many of graphene’s properties and exhibits optical fluorescence emission in the visible/near-infrared, which makes it a candidate for novel applications such as optoelectronic transistors, light emitting diodes (LEDs), and solar cells. Therefore, finding a way to alter optical and electronic properties of GO will lead to more versatility and control among the aforementioned applications.
In this work, we studied the potential use of GO for microelectronic applications by observing the fluorescence of this material under the electric field. A dried GO/PVP film was subject up to 1.6 V/µm in between transparent conductive ITO electrodes resulting in observable quenching of fluorescence emission as the field was applied. The emission was further partially restored at 0 field. Additionally, microscopic flakes of graphene oxide deposited onto interdigitated 10 µm electrodes were subject to 100V/µm with no breakdown current detected. The fluorescence of individual flakes, observed via visible fluorescence microscopy, experienced substantial field-dependent quenching. In aqueous suspensions GO flakes exhibited electrophoretic migration signifying of charge separation. As a result of this work we suggest the potential of varying electronic and optical properties of graphene oxide via the electric field for the advancement and control over its optoelectronic device applications.

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PHYS2018SENGER4580 PHYS

Observing Massive Gas Outflow from Supernovae Explosions around the Large Magellanic Cloud Galaxy

Type: Undergraduate
Author(s): Brian Senger Physics & Astronomy
Advisor(s): Kat Barger Physics & Astronomy

Within the Large Magellanic Cloud (LMC) galaxy, there are huge gaseous outflows that originated from violent supernovae explosions within this galaxy. Observing this outflow that is being kicked out from the LMC reveals that there is ionized gas present, which can be trace by using Ha emission. Using observations from the Wisconsin Ha Mapper (WHAM) in Chile, we are mapping out the Ha emission that is being kicked out of the LMC. In this project, I am removing the imprint of the Earth’s atmosphere in order to isolate the gas cloud. This will be used to determine how much gas is being thrown out of the galaxy. The more gas the galaxy loses, the more it would not be able to make stars in the future.

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