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GEOL2018OHRMUNDT44993 GEOL

Mapping geology of SW Namibia using Landsat-8 band ratios

Type: Undergraduate
Author(s): Sierra Ohrmundt Geological Sciences
Advisor(s): Tamie Morgan Geological Sciences

Landsat-8 data was used to test the effectiveness of using spectral analysis and remote sensing in the differentiation of lithological units and mapping geology in Namibia. The study area is located in SW Namibia, in an arid region with little vegetation, making it an ideal place for remote sensing analysis. Different color composites and band ratios were compared to find the image providing the most geologic information and highest contrast between units. A false color composite (6,3,2 in red-green-blue) was first created to to show differences in bare earth, and from there, various band ratio combinations were created. Geologic maps were used to verify the results and select the best band combination. The best color composite image was created using band ratios from (7/6, 6/5, 4/2), and allowed identification of lithological units and vegetation. The results show that it is possible to draw valid lithological conclusions from spectral patterns, and that high quality imagery can be used to update existing geologic maps or used for exploration.

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GEOL2018PATE42788 GEOL

Drainage Area Climate Classification

Type: Undergraduate
Author(s): Jacob Pate Geological Sciences
Advisor(s): Tamie Morgan Geological Sciences

SRS Abstract Drainage Area Climate Classification

For my SRS project I will be determining the climate(s) within a given polygon. The Polygon size and shape will be determined from a specified drainage area for a given stream. I will be using over 400 stream data points with a series of drainage area shape files given to me by Nicole Wilson. I will base the climate on the gauge site location within the drainage area. The koppen climate classification scheme will then be used to specify each drainage area.

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GEOL2018WALKER38503 GEOL

Cobalt Cache: Finding a Solution for Runaway Cobalt Demand

Type: Undergraduate
Author(s): John David Walker IV Geological Sciences
Advisor(s): Tamie Morgan Geological Sciences

Public awareness of human rights violations in cobalt-rich mines of the Democratic Republic of Congo have American cobalt consumers scrambling for reliable suppliers to meet rising demand, with uncertainties about futures in cobalt's supply chain. Global cobalt production supply forecast falls short of global demand forecast for the next ten years, even with the completions of major planned mined projects. The exponential increase in demand for cobalt results from its utility in personal electronics batteries, electric vehicle batteries, and jet engine construction. Chemical extracting operations whose sole purposes are to extract cobalt are not profitable in the status quo, leaving a window of opportunity for reclaimed cobalt to take hold in the market. This project studies consumer patterns to determine "urban mine" qualities in Texas. The resulting analysis exists to be cross-applied to other states to determine target regions best suited for cobalt reclamation strategies in hopes of securing America's geopolitical mineral stability.

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INTR2018FRANKLIN55390 INTR

Extinction Learning Deficits Precede Acquisition Deficits in a Mouse Model of Alzheimer’s Disease

Type: Undergraduate
Author(s): Christian Franklin Biology Julia Peterman Psychology Jordon White Psychology
Advisor(s): Michael Chumley Biology Gary Boehm Psychology Meredith Curtis Biology

Alzheimer’s disease (AD) is a progressive brain disorder and the most common form of dementia. The disease gradually destroys brain cells, leading to confusion, erratic behavior, and severe loss of memory. Alzheimer’s is eventually fatal, and no treatment or cure has been discovered. Researchers aim to better understand Alzheimer’s pathology through the use of a transgenic mouse model of AD, the 5xFAD mice. A previous study by Bonardi et al. (2011) has shown that another model of AD, the APP/PS1 mouse, exhibits a deficit in extinction learning before it displays a deficit in acquisition. We aim to determine if this same trend exists in 5xFAD mice, despite having more extensive genetic mutations. Learning will be assessed using the Contextual Fear Conditioning (CFC) paradigm, where the mice are introduced to an environmental context and experience a mild aversive stimulus. When reintroduced to the context 24 hours later, mice will freeze if they acquired a memory for the pairing of an aversive stimulus with the novel context. Freezing is an instinctive rodent fear response. After repeated trials of exposure to the environment in the absence of an aversive stimulus, the mice gradually freeze less. This is indicative of new learning of the environment no longer being paired with the stimulus, or extinction of the initial association. The 5xFAD mice typically exhibit impaired acquisition by 6 months of age as compared to wild type mice. The present study examined if the 5xFAD mice would display a deficit in extinction learning prior to this deficit in acquisition. Preliminary data indicate that 5xFAD mice, like APP/PS1 mice, show a deficit in memory extinction before they exhibit a loss of memory acquisition. Three-month old FAD mice extinguish more slowly than three-month old wild type mice, but show no difference in acquisition. This research is important because it indicates alternative cognitive measures may allow for earlier diagnosis of neurodegenerative diseases, such as AD.

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INTR2018KINSINGER59613 INTR

Reducing ROS and Chelating Metal Ions in Neuronal Cells Using Novel Compounds

Type: Undergraduate
Author(s): Olivia Kinsinger Interdisciplinary
Advisor(s): Giridhar Akkaraju Biology

It is estimated that 45% of people over the age of 85 in the U.S. suffer from Alzheimer’s disease. Patients with Alzheimer’s disease, which is characterized by cognitive deficiencies and memory loss, have higher concentrations of amyloid plaques in brain tissue than patients without the disease. Abnormal levels of transition metal ions Fe, Zn, and Cu in brain tissue are associated with amyloid beta plaques and also have been shown to catalyze the generation of excess reactive oxygen species (ROS) and cause oxidative stress. The combination of the ROS generation and the amyloid plaque formation results in neurodegeneration, which ultimately causes the memory loss and ultimate death associated with Alzheimer’s. We have synthesized the compounds L2 and L4 which are designed to be chelating agents of metal ions and also scavengers of ROS. We hypothesize that due to their chelating properties and pyridol groups, L2 and L4 should reduce oxidative damage in neuronal cells by chelating metal ions and scavenging radicals. Furthermore, we hypothesize that due to its extra pyridol group, L4 will be a stronger antioxidant than L2. The cytotoxicity of the compounds was tested on HT-22 neuronal cells. Neuronal cells will be treated with BSO, a compound that induces formation of ROS, in the presence and absence of L2 and L4. If our hypothesis is correct, our compounds should reduce the oxidative damage induced by BSO, and L4 should be more effective at doing so than L2.

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INTR2018LOPEZ34191 INTR

Reduced inflammatory response and amyloid-beta production in mice previously exposed to LPS

Type: Undergraduate
Author(s): Sofia Lopez Psychology Micah Eimerbrink Psychology Amy Hardy Biology Lauren Nakhleh Biology Kelsey Paulhus Biology Julia Peterman Psychology Morgan Thompson Biology Jordon White Psychology Austin Williams Biology
Advisor(s): Gary Boehm Psychology Michael Chumley Biology Meredith Curtis Biology

Alzheimer’s disease (AD) is a neurodegenerative condition in which beta-amyloid protein accumulates into plaques, and tau protein forms neurofibrillary tangles. In the past, our laboratory has shown that repeated inflammatory events increase beta-amyloid in the hippocampus of male C57BL6/J mice. We sought to determine the effect of a second exposure to the bacterial mimetic lipopolysaccharide (LPS) on beta amyloid accumulation. An initial round of seven, once daily LPS or sterile saline injections, was administered to male C57BL6/J adult mice. Fourteen days after the last injection, a second round of LPS or saline injections was given, followed by tissue collection and quantification of beta-amyloid levels in the hippocampus. The results showed that animals injected with two rounds of LPS had significantly lower levels of beta-amyloid accumulation than those animals injected with just a single round of LPS, although both groups had significantly higher levels of beta-amyloid than the saline control animals. These results suggest a reduced inflammatory response following a secondary exposure to LPS. More specifically, animals exposed to LPS for a second time showed significantly less central and peripheral inflammation four hours after LPS administration than animals with no prior exposure. In addition, increased levels of IgM and IgG were discovered in the mice with prior LPS exposure. This could indicate possible antibody production against LPS or beta-amyloid rather than tolerance of the LPS as a mechanism for the reduced inflammatory response. In order to establish whether this results in a life-long effect, we are currently exploring the impact of LPS administration in old age for mice who were exposed to LPS earlier in life.

(Presentation is private)

INTR2018LUCAS11885 INTR

Spark: Smart Parking for an Interconnected Campus

Type: Undergraduate
Author(s): Blake Lucas Engineering
Advisor(s): Liran Ma Computer Science

With the increasing student population trend at TCU, parking on campus is equally increasing
in difficulty. Due to the limited campus space, expanding parking availability is not a feasible
solution. Spark is a smart parking system that monitors the status of each space in parking lots,
indicating the space’s occupancy status on an aerial “Google Maps” view of the parking lot in a
smartphone application and, potentially, a website. The application could be linked to the TCU
Single-Sign-On for increased security and to make it easier for TCU students, faculty, and staff
to save their parking preferences. Spark can measure the fill rate of individual lots, recommend
a time-to-leave to procure a parking spot, and even provide update notifications on the status
of the user’s preferred lots.

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MATH2018DOAN62209 MATH

A Numerical Approximation for Eigenvalues of Hyperbolic Polygons

Type: Undergraduate
Author(s): Thinh Doan Mathematics
Advisor(s): Ken Richardson Mathematics

Using the finite element method as a numerical approximation in solving for eigenvalues of the hyperbolic Laplacian, this research investigates the estimates of the first two eigenvalues with Dirichlet and Neumann boundary conditions on bounded domains in the upper half plane. Examples of finite element code using Matlab are presented to illustrate how to obtain these approximations for hyperbolic polygons. These values can further be used to shed light on the Selberg and Fundamental Gap conjectures.

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MATH2018HOWELL16095 MATH

Analyzing Differences in Personality Structure by Age Using Topological Data Analysis

Type: Undergraduate
Author(s): Jacob Howell Mathematics
Advisor(s): Eric Hanson Mathematics

In the past, Personality Psychologists have commonly applied clustering techniques on questionnaire data to analyze personality structure. The purpose of this research is to determine if techniques from topological data analysis can provide a greater understanding of personality. Specifically, persistent homology was used to determine clusters topologically and analyze the ‘shape’ of the data. Previous work we have done focused on seeing how persistent homology can provide insight on identifying the key (most persistent) clusters in the data. New analysis looks to see how the Big 5 Personality Factors cluster together as a function of age.

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NTDT2018BENEDICT28698 NTDT

SENSORY ACCEPTABILITY OF VEGAN INGREDIENT SUBSTITUTIONS IN ICE CREAM

Type: Undergraduate
Author(s): Nicholle Benedict Nutritional Sciences Chandler Bourff Nutritional Sciences Maria Martinez Nutritional Sciences
Advisor(s): Anne VanBeber Nutritional Sciences Lyn Dart Nutritional Sciences

Background: To replace milk fats and eggs commonly found in ice cream, vegan varieties substitute with vegetable fats and/or pureed fruits. Vegan ingredient substitutions for ice cream must contain similar structural components to milk fat to preserve the expected texture/mouthfeel of the product. The purposes of this study were 1) to measure university students’ preferences and sensory ratings of vegan ice cream substitutions and 2) to identify which ingredients act as the best replacements.

Methods: 54 students enrolled in one of two TCU Nutritional Sciences (NTDT) courses participated in this single-blind, cross-sectional study. Subjects completed sensory evaluation of three homemade vegan ice creams containing different structural/flavor components. Sample A included coffee, cashews, and coconut cream; B used coconut cream and dates, and C contained coconut milk. Evaluations took place on two separate occasions in the NTDT Laboratory Kitchens. Flavor, sweetness, texture, mouthfeel, eye appeal, color, and overall rating of vegan ingredient substitutions for ice cream recipes were assessed. Sensory criteria responses were analyzed using SPSS XIX. Frequency distributions, ANOVAs, correlations, and descriptive statistics were determined to meet study objectives (p≤0.05). Protocol was approved by the TCU IRB.

Results: 53% of participants preferred the flavor of sample A, 42% of participants reported that sample B was the preferred flavor, and sample C received the lowest overall acceptability rating, with 73% of the participants disliking the flavor. More than 50% of participants stated sample A was most similar to traditionally-prepared non-vegan ice cream, and 78% of participants stated that they would consume these ice creams outside of the study.

Conclusions: Acceptable vegan ice cream fat substitutes are available. Cashew, coconut cream, dates, and coffee contributed to the rich flavors, creamy textures, and overall desirable sensory qualities in samples A and B. Coconut milk, utilized in sample C, contributed to an undesirable and unacceptable crystallized texture.

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